Yuen-Zhou Research Group
Theory of molecular photonics

Peer-reviewed articles

• L. A. Martínez-Martínez and J. Yuen-Zhou,  Comment on 'Quantum theory of collective strong coupling of molecular vibrations with a microcavity mode' , New J. Phys. 20 (2018) 018002

• B. Xiang, R. F. Ribeiro, A. D. Dunkelberger, J. Wang, Y. Li, B. S. Simpkins, J. C. Owrutsky, J. Yuen-Zhou and W. Xiong,  Revealing Hidden Vibration Polariton Interactions by 2D IR Spectroscopy , submitted arXiv:1711.11222.

• R. F. Ribeiro, A. D. Dunkelberger, B. Xiang, W. Xiong, B. S. Simpkins, J. C. Owrutsky and J. Yuen-Zhou,  Theory for Nonlinear Spectroscopy of Vibrational Polaritons , submitted arXiv:1711.11242.

• L. A. Martínez-Martínez, M. Du, Raphael F. Ribeiro, S. Kéna-Cohen and J. Yuen-Zhou,  Polariton-assisted Singlet Fission in Acene Aggregates , submitted arXiv:1711.11264.

• M. Du, L. A. Martínez-Martínez, R. F. Ribeiro, Z. Hu, V. M. Menon and J. Yuen-Zhou,  Theory of polariton long-range excitation energy transfer, submitted arXiv/1711.11576.

• J. Campos Gonzalez Angulo, R. Alberstein, R. F. Ribeiro, F. A. Tezcan and J. Yuen-Zhou, Computational methodology for a coarse-grained simulation of auxetic, two-dimensional crystal dynamics, submitted arXiv:1711.11574.

• J. Yuen-Zhou, Semion K. Saikin, and Vinod Menon, Plexciton photoluminescence: superradiance and van Hove anomalies, submitted.

• R. F. Ribeiro and J. Yuen-Zhou, Vibronic ground-state degeneracies and the Berry Phase, submitted arXiV/1706.00039.

• L. A. Martínez-Martínez, R. F. Ribeiro, J. A. Campos-González-Angulo, and J. Yuen-Zhou, Can ultrastrong coupling change ground state chemical reactions?, ACS Photonics, article ASAP.

• R. F. Ribeiro and J. Yuen-Zhou, Continuous vibronic symmetries in Jahn-Teller models: local and global aspects, submitted arXiV/1705.08104.

• R. de J. León Montiel, Z. Hu, and J. Yuen-Zhou, Genuinely quantum effects in nonlinear spectroscopy: vacuum fluctuations and their induced superradiance, submitted 2016.

• J. Yuen-Zhou, S. K. Saikin, T. Zhu, M. Onbalsi, C. Ross, V. Bulovic, and M. Baldo, Plexcitons: Dirac points and topological modes, Nature Communications 7, 11783, 2016.

• A. Johnson, J. Yuen-Zhou, A. Aspuru-Guzik, and J. Krich, Practical witness for electronic coherences, Journal of Chemical Physics 141, 244109 (2014).

• J. Yuen-Zhou, S. Saikin, N. Yao, and A. Aspuru-Guzik, Topologically protected excitons in porphyrin thin films, in press, Nature Materials 13, 1026 (2014).

• J. Yuen-Zhou, D. Arias, D. Eisele, J. J. Krich, C. Steiner, K. A. Nelson, and A. Aspuru. Guzik, Coherent exciton dynamics in supramolecular light-harvesting nanotubes revealed by ultrafast quantum process tomography, ACS Nano 8 (6) 5527 (2014).

• J. Yuen-Zhou and A. Aspuru-Guzik, Remarks on time-dependent [current]-density functional theory for open quantum systems, Phys. Chem. Chem. Phys. 15, 12626 (2013). Selected as a "hot article" by the editors.

• I. Kassal, J. Yuen-Zhou, and Saleh Rahim-Keshari, Does coherence enhance transport in photosynthesis, J. Phys. Chem. Lett. 4 (3), 362 (2012). 

• J. Yuen-Zhou, Jacob J. Krich, and A. Aspuru-Guzik, A witness for coherent electronic vs vibronic-only oscillations in ultrafast spectroscopy, J. Chem. Phys. 136, 234501 (2012). 

• J. Yuen-Zhou, Jacob J. Krich, Masoud Mohseni, and A. Aspuru-Guzik, Quantum state and process tomography of energy transfer systems via ultrafast spectroscopy, Proc. Nat. Acad. Sci. USA. 108, 43, 17615 (2011).

• J. Yuen-Zhou and A. Aspuru-Guzik, Quantum process tomography of excitonic dimers from two-dimensional electronic spectroscopy I: General theory and application to homodimers, J. Chem. Phys. 134, 134505 (2011). Also selected for the Virtual Journal of Quantum Information, April (2011) and the Virtual Journal of Ultrafast Science, May (2011). Also part of J. Chem. Phys. Editor's choice 2011.

• J. Yuen-Zhou, D.G. Tempel, C. Rodríguez-Rosario and A. Aspuru-Guzik, Time-Dependent Density Functional Theory for Open Quantum Systems with Unitary Propagation, Phys. Rev. Lett. 104, 043001 (2010).

• J. Yuen-Zhou, C. Rodríguez-Rosario and A. Aspuru-Guzik, Time-dependent current-density functional theory for generalized open quantum systems, Phys. Chem. Chem. Phys., Special Issue on TD-DFT, 11, 4509, (2009). Selected as a "hot article" by the editors.

Non-peer-reviewed articles

• P. Rebentrost, S. Shim, J. Yuen-Zhou, A. Aspuru-Guzik, Characterization and quantification of the role of coherence in ultrafast quantum biological experiments using quantum master equations, atomistic simulations, and quantum process tomography, Procedia Chem 3, 332, (2011).


• J. Yuen-Zhou, J. J. Krich, I. Kassal, A. Johnson, A. Aspuru-Guzik, Ultrafast spectroscopy: quantum information and wavepackets, IOP e-book, in press (2014).

Chapters in books

• D. Tempel, J. Yuen-Zhou and A. Aspuru-Guzik, Master equation approach to Time Dependent Density Functional Theory for Open Quantum Systems, in Fundamentals of Time-Dependent Density Functional Theory, eds. M. A. L. Marques, N.T. Maitra, F. Nogueira, E. K. U. Gross, and A. Rubio (Lecture Notes in Physics 837, Springer-Verlag, Berlin-Heidelberg, 2011).
• J. Yuen-Zhou, J. J. Krich, I. Kassal, A. Aspuru-Guzik, The quantum process tomography approach to ultrafast spectroscopy, in Ultrafast Biomolecular Dynamics at the Nanoscale, eds. I. Burghardt and S. Haacke, Pan Stanford, in press (2014).