Publications

Submissions and Preprints
1.  J. Campos Gonzalez Angulo, R. Alberstein, R.F. Ribeiro, F.A. Tezcan and J. Yuen-Zhou. Computational methodology for a coarse-grained simulation of auxetic, two-dimensional crystal dynamics. Submitted. arXiv:1711.11574.

2.  J. Yuen-Zhou, S.K. Saikin and V. Menon. Plexciton photoluminescence: van Hove anomalies and superradiance. Submitted. arXiV:1711.11213.

3.  R. de J. León Montiel, Z. Hu and J. Yuen-Zhou. Genuinely quantum effects in nonlinear spectroscopy: vacuum fluctuations and their induced superradiance. Submitted. arXiV:1606.05717.

2018
1.  R.F. Ribeiro, L.A. Martínez-Martínez, M. Du, J.A. Campos-González-Angulo and J. Yuen-Zhou. Polariton chemistry: controlling molecular dynamics with optical cavities. (2018) Chem. Sci. DOI:10.1039/C8SC01043A.

2.  R.F. Ribeiro and J. Yuen-Zhou. Continuous vibronic symmetries in Jahn-Teller models: local and global aspects. (2018) J. Phys. B: Condens. Matter. DOI:10.1088/1361-648X/aac89e.

3.  R.F. Ribeiro, A. D. Dunkelberger, B. Xiang, W. Xiong, B. S. Simpkins, J. C. Owrutsky and J. Yuen-Zhou. Theory for Nonlinear Spectroscopy of Vibrational Polaritons. (2018) J. Phys. Chem. Lett. 3766--3771 (2018).

4.  M. Du, L.A. Martínez-Martínez, R.F. Ribeiro, Z. Hu, V.M. Menon and J. Yuen-Zhou. Theory of polariton long-range excitation energy transfer. (2018) Chem. Sci.DOI:10.1039/C8SC00171E.

5.  B. Xiang, R.F. Ribeiro, A.D. Dunkelberger, J. Wang, Y. Li, B.S. Simpkins, J.C. Owrutsky, J. Yuen-Zhou and W. Xiong.  Two-dimensional infrared spectroscopy of vibrational polaritons. (2018) Proc. Nat. Acad. Sci. DOI:10.1073/pnas.1722063115.

6.  L.A. Martínez-Martínez, M. Du, R.F. Ribeiro, S. Kéna-Cohen and J. Yuen-Zhou. Polariton-assisted Singlet Fission in Acene Aggregates. (2018) J. Phys. Chem. Lett. 9, 8, 1951-1957.
 Selected as ACS Editor's choice.

7.  L.A. Martínez-Martínez and J. Yuen-Zhou.  Comment on 'Quantum theory of collective strong coupling of molecular vibrations with a microcavity mode'. (2018) New J. Phys. 20:018002.

8.  L.A. Martínez-Martínez, R.F. Ribeiro, J.A. Campos-González-Angulo, and J. Yuen-Zhou. Can ultrastrong coupling change ground state chemical reactions? (2018) ACS Photonics. 5(1):167–176.
2017
1.  R.F. Ribeiro and J. Yuen-Zhou. Vibronic ground-state degeneracies and the Berry Phase: A continuous symmetry perspective. (2017) J. Phys. Chem. Lett. 9(1):242-247.
2016
1.  J. Yuen-Zhou, S.K. Saikin, T.Zhu, M. Onbalsi, C. Ross, V. Bulovic and M. Baldo. Plexciton Dirac points and topological modes. (2016) Nature Communications. 7:11783.
2015
1.  A. Johnson, J. Yuen-Zhou, A. Aspuru-Guzik and J.J. Krich. Practical witness for electronic coherences. (2015) Journal of Chemical Physics. 141:244109.
2014
1.  J. Yuen-Zhou, S. Saikin, N. Yao and A. Aspuru-Guzik. Topologically protected excitons in porphyrin thin films. (2014) Nature Materials 13:1026.

2.  J. Yuen-Zhou, D. Arias, D. Eisele, J.J. Krich, C. Steiner, K.A. Nelson, and A. Aspuru-Guzik. Coherent exciton dynamics in supramolecular light-harvesting nanotubes revealed by ultrafast quantum process tomography. (2014) ACS Nano 8(6):5527.
2013
1.  J. Yuen-Zhou and A. Aspuru-Guzik. Remarks on time-dependent [current]-density functional theory for open quantum systems. (2013) Phys. Chem. Chem. Phys. 15:12626.
 Selected as a "hot article" by the editors.
2012
1.  I. Kassal, J. Yuen-Zhou and S. Rahim-Keshari. Does coherence enhance transport in photosynthesis? (2012) J. Phys. Chem. Lett. 4(3):362.

2.  J. Yuen-Zhou, J.J. Krich and A. Aspuru-Guzik. A witness for coherent electronic vs vibronic-only oscillations in ultrafast spectroscopy. (2012) J. Chem. Phys. 136:234501.
2011
1.  J. Yuen-Zhou, J.J. Krich, M. Mohseni and A. Aspuru-Guzik. Quantum state and process tomography of energy transfer systems via ultrafast spectroscopy. (2011) Proc. Nat. Acad. Sci. USA. 108(43):17615.

2.  J. Yuen-Zhou and A. Aspuru-Guzik. Quantum process tomography of excitonic dimers from two-dimensional electronic spectroscopy I: General theory and application to homodimers. (2011) J. Chem. Phys. 134:134505.
 Selected for the Virtual Journal of Quantum Information, April (2011) and the Virtual Journal of Ultrafast Science, May (2011).
 Selected for J. Chem. Phys. Editor's choice (2011).
2010
1.  J. Yuen-Zhou, D.G. Tempel, C. Rodríguez-Rosario and A. Aspuru-Guzik. Time-Dependent Density Functional Theory for Open Quantum Systems with Unitary Propagation. (2010) Phys. Rev. Lett. 104:043001.
2009
1.  J. Yuen-Zhou, C. Rodríguez-Rosario and A. Aspuru-Guzik. Time-dependent current-density functional theory for generalized open quantum systems. (2009) Phys. Chem. Chem. Phys. 11:4509. Special Issue on TD-DFT.
 Selected as a "hot article" by the editors.
Books
1.  J. Yuen-Zhou, J.J. Krich, I. Kassal, A. Johnson and A. Aspuru-Guzik. Ultrafast spectroscopy: quantum information and wavepackets. (2014) IOP e-book. ISBN:978-0-750-31062-8.
Book Chapters
1.  J. Yuen-Zhou, J.J. Krich, I. Kassal and A. Aspuru-Guzik. Ultrafast Spectroscopy: Quantum Information and Wave Packets. (2017) In: I. Burghardt and S. Haacke (eds) Ultrafast Dynamics at the Nanoscale: Biomolecules and Supramolecular Assemblies. Pan Stanford Publishing. ISBN:978-981-4745-34-5.

2.  D.G. Tempel, J. Yuen-Zhou and A. Aspuru-Guzik. Open Quantum Systems: Density Matrix Formalism and Applications. (2012) In: Marques M., Maitra N., Nogueira F., Gross E., Rubio A. (eds) Fundamentals of Time-Dependent Density Functional Theory. Lecture Notes in Physics, vol 837. Springer, Berlin, Heidelberg